Fundamentals of Biochemistry: Life at the Molecular Level 5th Edition

Published by Wiley
ISBN 10: 1118918401
ISBN 13: 978-1-11891-840-1

Chapter 6 - Proteins: Three Dimensional Structure - Exercises - Page 178: 25

Answer

The 2 possible reasons are 1. Pro lacks a backbone N-H group and cannot participate in H bonding, however since the four most N terminal residues of an alpha helix cannot donate hydrogen bonds within the alpha helix, Pro can occupy the N terminal turn. 2. Pro normally sterically clashes with the residue one turn towards the N terminus, but it has no steric clashes in the N-terminal turn itself.

Work Step by Step

The 2 possible reasons are 1. Pro lacks a backbone N-H group and cannot participate in H bonding, however since the four most N terminal residues of an alpha helix cannot donate hydrogen bonds within the alpha helix, Pro can occupy the N terminal turn. 2. Pro normally sterically clashes with the residue one turn towards the N terminus, but it has no steric clashes in the N-terminal turn itself.
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