Komunyakaa married Australian novelist Mandy Sayer in 1985. That year, he was hired as an associate professor at Indiana University Bloomington. He also held the Ruth Lilly Professorship for two years from 1989 to 1990. He and Sayer were married for ten years.
He later had a relationship with India-born poet Reetika Vazirani with whom he had a child. Vazirani died in a murder-suicide, killing their son Jehan and herself in 2003; he was two years old.[9]