- Three Lives (1909)
- White Wines (1913)
- Tender Buttons: Objects, Food, Rooms (1914) online at Bartleby
- An Exercise in Analysis (1917)
- A Circular Play (1920)
- Geography and Plays (1922), includes A List
- The Making of Americans: Being a History of a Family's Progress (written 1906–8, published 1925)
- Four Saints in Three Acts (libretto, 1929: music by Virgil Thomson, 1934)
- Useful Knowledge (1929)
- An Acquaintance with Description (1929)
- Lucy Church Amiably (1930). First Edition published by Imprimerie Union in Paris. The First American edition was published in 1969 by Something Press.
- How to Write (1931)
- They must. Be Wedded. To Their Wife (1931)
- Operas and Plays (1932)
- Matisse Picasso and Gertrude Stein with Two Shorter Stories (1933)
- The Autobiography of Alice B. Toklas (1933a)
- Blood on the Dining Room Floor (1933b)
- Portraits and Prayers (1934)
- Lectures in America (1935)
- The Geographical History of America or the Relation of Human Nature to the Human Mind (1936)
- Everybody's Autobiography (1937)
- Picasso, photo. Cecil Beaton (1938)
- Doctor Faustus Lights the Lights (1938)
- The World is Round, UK edition illus. Sir Francis Rose; US edition illus. Clement Hurd (1939)
- Paris France (1940)
- Ida A Novel (1941)
- Three Sisters Who Are Not Sisters (1943)
- Wars I Have Seen (1945a)
- À la recherche d'un jeune peintre (Max-Pol Fouchet, ed., 1945b)
- Reflections on the Atomic Bomb (1946a)
- Brewsie and Willie (1946b)
- The Mother of Us All (libretto, 1946c: music by Virgil Thompson 1947)
- Gertrude Stein on Picasso (1946d)
- Four in America (1947)
- Mrs. Reynolds (1947)
- Last Operas and Plays (Carl van Vechten, ed., 1949)
- The Things as They Are (written as Q.E.D. in 1903, published 1950)
- Patriarchal Poetry (1953)
- Alphabets and Birthdays (1957)
- Fernhurst, Q.E.D. and Other Early Writings (1971)
- Stein, Gertrude; van Vechten, Carl (1986), Burns, Edward (ed.), The Letters of Gertrude Stein and Carl Van Vechten, 1913–1946, New York: Columbia University Press, ISBN 978-0-231-06308-1..
- Stein, Gertrude; Wilder, Thornton (1996), Burns, Edward; Dydo, Ulla, eds., The Letters of Gertrude Stein and Thornton Wilder, Yale University Press, ISBN 978-0-300-06774-3.
- Stein, Gertrude (1998a), Chessman, Harriet; Stimpson, Catharine R. (eds.), Writings 1903–1932, Library of America, ISBN 978-1-883011-40-6.
- ———————— (1998b), Chessman, Harriet; Stimpson, Catharine R. (eds.), Writings 1932–1946, Library of America, ISBN 978-1-883011-41-3.
- Toklas, Alice (1973), Burns, Edward (ed.), Staying on Alone: Letters, New York: Liveright, ISBN 978-0-87140-569-2.
- Grahn, Judy, ed. (1989), Really Reading Gertrude Stein: A Selected Anthology with Essays by Judy Grahn, Crossing Press, ISBN 978-0-89594-380-4
- Vechten, Carl Van, ed. (1990). Selected Writings of Gertrude Stein. ISBN 0-679-72464-8
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